Data I/O

MERLIN includes several convenience functions for data input and output. Since pyMERLIN is tightly integrated with RIESLING, functions for reading k-space and image .h5 files have been included.

ITK functionality

pymerlin.dataIO.create_image

Create an ITK image object from array

File reading and manipulation

pymerlin.dataIO.parse_fname	Parse the filename from a NIFTI file
pymerlin.dataIO.arg_check_h5	Check h5 file ending
pymerlin.dataIO.arg_check_nii	Check nifti file ending
pymerlin.dataIO.check_filename	Check if file exists
pymerlin.dataIO.read_image_h5	Read image h5 file
pymerlin.dataIO.read_radial_h5	Read radial k-space h5 file
pymerlin.dataIO.read_ismrmrd	Read ISMRM Raw Data format
pymerlin.dataIO.make_3D	Extract first 3D volume from 4D dataset